Merge branch 'main' into content-extension

This commit is contained in:
Francisco Arceo 2025-09-07 12:38:35 -06:00 committed by GitHub
commit 354ed48598
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227 changed files with 21224 additions and 10798 deletions

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@ -4,53 +4,55 @@
# This source code is licensed under the terms described in the LICENSE file in
# the root directory of this source tree.
import os
from pydantic import BaseModel, Field
class BedrockBaseConfig(BaseModel):
aws_access_key_id: str | None = Field(
default=None,
default_factory=lambda: os.getenv("AWS_ACCESS_KEY_ID"),
description="The AWS access key to use. Default use environment variable: AWS_ACCESS_KEY_ID",
)
aws_secret_access_key: str | None = Field(
default=None,
default_factory=lambda: os.getenv("AWS_SECRET_ACCESS_KEY"),
description="The AWS secret access key to use. Default use environment variable: AWS_SECRET_ACCESS_KEY",
)
aws_session_token: str | None = Field(
default=None,
default_factory=lambda: os.getenv("AWS_SESSION_TOKEN"),
description="The AWS session token to use. Default use environment variable: AWS_SESSION_TOKEN",
)
region_name: str | None = Field(
default=None,
default_factory=lambda: os.getenv("AWS_DEFAULT_REGION"),
description="The default AWS Region to use, for example, us-west-1 or us-west-2."
"Default use environment variable: AWS_DEFAULT_REGION",
)
profile_name: str | None = Field(
default=None,
default_factory=lambda: os.getenv("AWS_PROFILE"),
description="The profile name that contains credentials to use.Default use environment variable: AWS_PROFILE",
)
total_max_attempts: int | None = Field(
default=None,
default_factory=lambda: int(val) if (val := os.getenv("AWS_MAX_ATTEMPTS")) else None,
description="An integer representing the maximum number of attempts that will be made for a single request, "
"including the initial attempt. Default use environment variable: AWS_MAX_ATTEMPTS",
)
retry_mode: str | None = Field(
default=None,
default_factory=lambda: os.getenv("AWS_RETRY_MODE"),
description="A string representing the type of retries Boto3 will perform."
"Default use environment variable: AWS_RETRY_MODE",
)
connect_timeout: float | None = Field(
default=60,
default_factory=lambda: float(os.getenv("AWS_CONNECT_TIMEOUT", "60")),
description="The time in seconds till a timeout exception is thrown when attempting to make a connection. "
"The default is 60 seconds.",
)
read_timeout: float | None = Field(
default=60,
default_factory=lambda: float(os.getenv("AWS_READ_TIMEOUT", "60")),
description="The time in seconds till a timeout exception is thrown when attempting to read from a connection."
"The default is 60 seconds.",
)
session_ttl: int | None = Field(
default=3600,
default_factory=lambda: int(os.getenv("AWS_SESSION_TTL", "3600")),
description="The time in seconds till a session expires. The default is 3600 seconds (1 hour).",
)

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@ -4,6 +4,7 @@
# This source code is licensed under the terms described in the LICENSE file in
# the root directory of this source tree.
import asyncio
import base64
import struct
from typing import TYPE_CHECKING
@ -43,9 +44,11 @@ class SentenceTransformerEmbeddingMixin:
task_type: EmbeddingTaskType | None = None,
) -> EmbeddingsResponse:
model = await self.model_store.get_model(model_id)
embedding_model = self._load_sentence_transformer_model(model.provider_resource_id)
embeddings = embedding_model.encode(
[interleaved_content_as_str(content) for content in contents], show_progress_bar=False
embedding_model = await self._load_sentence_transformer_model(model.provider_resource_id)
embeddings = await asyncio.to_thread(
embedding_model.encode,
[interleaved_content_as_str(content) for content in contents],
show_progress_bar=False,
)
return EmbeddingsResponse(embeddings=embeddings)
@ -64,8 +67,8 @@ class SentenceTransformerEmbeddingMixin:
# Get the model and generate embeddings
model_obj = await self.model_store.get_model(model)
embedding_model = self._load_sentence_transformer_model(model_obj.provider_resource_id)
embeddings = embedding_model.encode(input_list, show_progress_bar=False)
embedding_model = await self._load_sentence_transformer_model(model_obj.provider_resource_id)
embeddings = await asyncio.to_thread(embedding_model.encode, input_list, show_progress_bar=False)
# Convert embeddings to the requested format
data = []
@ -93,7 +96,7 @@ class SentenceTransformerEmbeddingMixin:
usage=usage,
)
def _load_sentence_transformer_model(self, model: str) -> "SentenceTransformer":
async def _load_sentence_transformer_model(self, model: str) -> "SentenceTransformer":
global EMBEDDING_MODELS
loaded_model = EMBEDDING_MODELS.get(model)
@ -101,8 +104,12 @@ class SentenceTransformerEmbeddingMixin:
return loaded_model
log.info(f"Loading sentence transformer for {model}...")
from sentence_transformers import SentenceTransformer
loaded_model = SentenceTransformer(model)
def _load_model():
from sentence_transformers import SentenceTransformer
return SentenceTransformer(model)
loaded_model = await asyncio.to_thread(_load_model)
EMBEDDING_MODELS[model] = loaded_model
return loaded_model

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@ -294,12 +294,12 @@ class VectorDBWithIndex:
_validate_embedding(c.embedding, i, self.vector_db.embedding_dimension)
if chunks_to_embed:
resp = await self.inference_api.embeddings(
resp = await self.inference_api.openai_embeddings(
self.vector_db.embedding_model,
[c.content for c in chunks_to_embed],
)
for c, embedding in zip(chunks_to_embed, resp.embeddings, strict=False):
c.embedding = embedding
for c, data in zip(chunks_to_embed, resp.data, strict=False):
c.embedding = data.embedding
embeddings = np.array([c.embedding for c in chunks], dtype=np.float32)
await self.index.add_chunks(chunks, embeddings)
@ -334,8 +334,8 @@ class VectorDBWithIndex:
if mode == "keyword":
return await self.index.query_keyword(query_string, k, score_threshold)
embeddings_response = await self.inference_api.embeddings(self.vector_db.embedding_model, [query_string])
query_vector = np.array(embeddings_response.embeddings[0], dtype=np.float32)
embeddings_response = await self.inference_api.openai_embeddings(self.vector_db.embedding_model, [query_string])
query_vector = np.array(embeddings_response.data[0].embedding, dtype=np.float32)
if mode == "hybrid":
return await self.index.query_hybrid(
query_vector, query_string, k, score_threshold, reranker_type, reranker_params

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@ -23,6 +23,7 @@ from sqlalchemy import (
)
from sqlalchemy.ext.asyncio import async_sessionmaker, create_async_engine
from sqlalchemy.ext.asyncio.engine import AsyncEngine
from sqlalchemy.sql.elements import ColumnElement
from llama_stack.apis.common.responses import PaginatedResponse
from llama_stack.log import get_logger
@ -43,6 +44,30 @@ TYPE_MAPPING: dict[ColumnType, Any] = {
}
def _build_where_expr(column: ColumnElement, value: Any) -> ColumnElement:
"""Return a SQLAlchemy expression for a where condition.
`value` may be a simple scalar (equality) or a mapping like {">": 123}.
The returned expression is a SQLAlchemy ColumnElement usable in query.where(...).
"""
if isinstance(value, Mapping):
if len(value) != 1:
raise ValueError(f"Operator mapping must have a single operator, got: {value}")
op, operand = next(iter(value.items()))
if op == "==" or op == "=":
return column == operand
if op == ">":
return column > operand
if op == "<":
return column < operand
if op == ">=":
return column >= operand
if op == "<=":
return column <= operand
raise ValueError(f"Unsupported operator '{op}' in where mapping")
return column == value
class SqlAlchemySqlStoreImpl(SqlStore):
def __init__(self, config: SqlAlchemySqlStoreConfig):
self.config = config
@ -111,7 +136,7 @@ class SqlAlchemySqlStoreImpl(SqlStore):
if where:
for key, value in where.items():
query = query.where(table_obj.c[key] == value)
query = query.where(_build_where_expr(table_obj.c[key], value))
if where_sql:
query = query.where(text(where_sql))
@ -222,7 +247,7 @@ class SqlAlchemySqlStoreImpl(SqlStore):
async with self.async_session() as session:
stmt = self.metadata.tables[table].update()
for key, value in where.items():
stmt = stmt.where(self.metadata.tables[table].c[key] == value)
stmt = stmt.where(_build_where_expr(self.metadata.tables[table].c[key], value))
await session.execute(stmt, data)
await session.commit()
@ -233,7 +258,7 @@ class SqlAlchemySqlStoreImpl(SqlStore):
async with self.async_session() as session:
stmt = self.metadata.tables[table].delete()
for key, value in where.items():
stmt = stmt.where(self.metadata.tables[table].c[key] == value)
stmt = stmt.where(_build_where_expr(self.metadata.tables[table].c[key], value))
await session.execute(stmt)
await session.commit()

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@ -67,6 +67,38 @@ async def client_wrapper(endpoint: str, headers: dict[str, str]) -> AsyncGenerat
raise AuthenticationRequiredError(exc) from exc
if i == len(connection_strategies) - 1:
raise
except* httpx.ConnectError as eg:
# Connection refused, server down, network unreachable
if i == len(connection_strategies) - 1:
error_msg = f"Failed to connect to MCP server at {endpoint}: Connection refused"
logger.error(f"MCP connection error: {error_msg}")
raise ConnectionError(error_msg) from eg
else:
logger.warning(
f"failed to connect to MCP server at {endpoint} via {strategy.name}, falling back to {connection_strategies[i + 1].name}"
)
except* httpx.TimeoutException as eg:
# Request timeout, server too slow
if i == len(connection_strategies) - 1:
error_msg = f"MCP server at {endpoint} timed out"
logger.error(f"MCP timeout error: {error_msg}")
raise TimeoutError(error_msg) from eg
else:
logger.warning(
f"MCP server at {endpoint} timed out via {strategy.name}, falling back to {connection_strategies[i + 1].name}"
)
except* httpx.RequestError as eg:
# DNS resolution failures, network errors, invalid URLs
if i == len(connection_strategies) - 1:
# Get the first exception's message for the error string
exc_msg = str(eg.exceptions[0]) if eg.exceptions else "Unknown error"
error_msg = f"Network error connecting to MCP server at {endpoint}: {exc_msg}"
logger.error(f"MCP network error: {error_msg}")
raise ConnectionError(error_msg) from eg
else:
logger.warning(
f"network error connecting to MCP server at {endpoint} via {strategy.name}, falling back to {connection_strategies[i + 1].name}"
)
except* McpError:
if i < len(connection_strategies) - 1:
logger.warning(

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@ -37,3 +37,122 @@ def sanitize_collection_name(name: str, weaviate_format=False) -> str:
else:
s = proper_case(re.sub(r"[^a-zA-Z0-9]", "", name))
return s
class WeightedInMemoryAggregator:
@staticmethod
def _normalize_scores(scores: dict[str, float]) -> dict[str, float]:
"""
Normalize scores to 0-1 range using min-max normalization.
Args:
scores: dictionary of scores with document IDs as keys and scores as values
Returns:
Normalized scores with document IDs as keys and normalized scores as values
"""
if not scores:
return {}
min_score, max_score = min(scores.values()), max(scores.values())
score_range = max_score - min_score
if score_range > 0:
return {doc_id: (score - min_score) / score_range for doc_id, score in scores.items()}
return dict.fromkeys(scores, 1.0)
@staticmethod
def weighted_rerank(
vector_scores: dict[str, float],
keyword_scores: dict[str, float],
alpha: float = 0.5,
) -> dict[str, float]:
"""
Rerank via weighted average of scores.
Args:
vector_scores: scores from vector search
keyword_scores: scores from keyword search
alpha: weight factor between 0 and 1 (default: 0.5)
0 = keyword only, 1 = vector only, 0.5 = equal weight
Returns:
All unique document IDs with weighted combined scores
"""
all_ids = set(vector_scores.keys()) | set(keyword_scores.keys())
normalized_vector_scores = WeightedInMemoryAggregator._normalize_scores(vector_scores)
normalized_keyword_scores = WeightedInMemoryAggregator._normalize_scores(keyword_scores)
# Weighted formula: score = (1-alpha) * keyword_score + alpha * vector_score
# alpha=0 means keyword only, alpha=1 means vector only
return {
doc_id: ((1 - alpha) * normalized_keyword_scores.get(doc_id, 0.0))
+ (alpha * normalized_vector_scores.get(doc_id, 0.0))
for doc_id in all_ids
}
@staticmethod
def rrf_rerank(
vector_scores: dict[str, float],
keyword_scores: dict[str, float],
impact_factor: float = 60.0,
) -> dict[str, float]:
"""
Rerank via Reciprocal Rank Fusion.
Args:
vector_scores: scores from vector search
keyword_scores: scores from keyword search
impact_factor: impact factor for RRF (default: 60.0)
Returns:
All unique document IDs with RRF combined scores
"""
# Convert scores to ranks
vector_ranks = {
doc_id: i + 1
for i, (doc_id, _) in enumerate(sorted(vector_scores.items(), key=lambda x: x[1], reverse=True))
}
keyword_ranks = {
doc_id: i + 1
for i, (doc_id, _) in enumerate(sorted(keyword_scores.items(), key=lambda x: x[1], reverse=True))
}
all_ids = set(vector_scores.keys()) | set(keyword_scores.keys())
rrf_scores = {}
for doc_id in all_ids:
vector_rank = vector_ranks.get(doc_id, float("inf"))
keyword_rank = keyword_ranks.get(doc_id, float("inf"))
# RRF formula: score = 1/(k + r) where k is impact_factor (default: 60.0) and r is the rank
rrf_scores[doc_id] = (1.0 / (impact_factor + vector_rank)) + (1.0 / (impact_factor + keyword_rank))
return rrf_scores
@staticmethod
def combine_search_results(
vector_scores: dict[str, float],
keyword_scores: dict[str, float],
reranker_type: str = "rrf",
reranker_params: dict[str, float] | None = None,
) -> dict[str, float]:
"""
Combine vector and keyword search results using specified reranking strategy.
Args:
vector_scores: scores from vector search
keyword_scores: scores from keyword search
reranker_type: type of reranker to use (default: RERANKER_TYPE_RRF)
reranker_params: parameters for the reranker
Returns:
All unique document IDs with combined scores
"""
if reranker_params is None:
reranker_params = {}
if reranker_type == "weighted":
alpha = reranker_params.get("alpha", 0.5)
return WeightedInMemoryAggregator.weighted_rerank(vector_scores, keyword_scores, alpha)
else:
# Default to RRF for None, RRF, or any unknown types
impact_factor = reranker_params.get("impact_factor", 60.0)
return WeightedInMemoryAggregator.rrf_rerank(vector_scores, keyword_scores, impact_factor)