build: configure ruff from pyproject.toml (#1100)

# What does this PR do?

- Remove hardcoded configurations from pre-commit.
- Allow configuration to be set via pyproject.toml.
- Merge .ruff.toml settings into pyproject.toml.
- Ensure the linter and formatter use the defined configuration instead
of being overridden by pre-commit.

Signed-off-by: Sébastien Han <seb@redhat.com>

[//]: # (If resolving an issue, uncomment and update the line below)
[//]: # (Closes #[issue-number])

## Test Plan
[Describe the tests you ran to verify your changes with result
summaries. *Provide clear instructions so the plan can be easily
re-executed.*]

[//]: # (## Documentation)

Signed-off-by: Sébastien Han <seb@redhat.com>

llama_stack/providers/inline/vector_io/sqlite_vec/sqlite_vec.py

@@ -80,7 +80,7 @@ class SQLiteVecIndex(EmbeddingIndex):
         try:
             # Start transaction
             cur.execute("BEGIN TRANSACTION")
-            for chunk, emb in zip(chunks, embeddings):
+            for chunk, emb in zip(chunks, embeddings, strict=False):
                 # Serialize and insert the chunk metadata.
                 chunk_json = chunk.model_dump_json()
                 cur.execute(f"INSERT INTO {self.metadata_table} (chunk) VALUES (?)", (chunk_json,))