diff --git a/src/client.ts b/src/client.ts
index 451325c..c76a538 100644
--- a/src/client.ts
+++ b/src/client.ts
@@ -18,7 +18,7 @@ import { SSEClientTransport } from '@modelcontextprotocol/sdk/client/sse.js'
 import { ListResourcesResultSchema, ListToolsResultSchema } from '@modelcontextprotocol/sdk/types.js'
 import { UnauthorizedError } from '@modelcontextprotocol/sdk/client/auth.js'
 import { NodeOAuthClientProvider } from './lib/node-oauth-client-provider'
-import { parseCommandLineArgs, setupOAuthCallbackServer, setupSignalHandlers } from './lib/utils'
+import { parseCommandLineArgs, setupOAuthCallbackServer, setupSignalHandlers, MCP_REMOTE_VERSION } from './lib/utils'
 
 /**
  * Main function to run the client
@@ -39,7 +39,7 @@ async function runClient(serverUrl: string, callbackPort: number, clean: boolean
   const client = new Client(
     {
       name: 'mcp-remote',
-      version: require('../package.json').version,
+      version: MCP_REMOTE_VERSION,
     },
     {
       capabilities: {},
diff --git a/src/lib/mcp-auth-config.ts b/src/lib/mcp-auth-config.ts
index f52fc64..e35badc 100644
--- a/src/lib/mcp-auth-config.ts
+++ b/src/lib/mcp-auth-config.ts
@@ -2,16 +2,17 @@ import crypto from 'crypto'
 import path from 'path'
 import os from 'os'
 import fs from 'fs/promises'
+import { MCP_REMOTE_VERSION } from './utils'
 
 /**
  * MCP Remote Authentication Configuration
- * 
+ *
  * This module handles the storage and retrieval of authentication-related data for MCP Remote.
- * 
+ *
  * Configuration directory structure:
  * - The config directory is determined by MCP_REMOTE_CONFIG_DIR env var or defaults to ~/.mcp-auth
  * - Each file is prefixed with a hash of the server URL to separate configurations for different servers
- * 
+ *
  * Files stored in the config directory:
  * - {server_hash}_client_info.json: Contains OAuth client registration information
  *   - Format: OAuthClientInformation object with client_id and other registration details
@@ -19,18 +20,14 @@ import fs from 'fs/promises'
  *   - Format: OAuthTokens object with access_token, refresh_token, and expiration information
  * - {server_hash}_code_verifier.txt: Contains the PKCE code verifier for the current OAuth flow
  *   - Format: Plain text string used for PKCE verification
- * 
+ *
  * All JSON files are stored with 2-space indentation for readability.
  */
 
 /**
  * Known configuration file names that might need to be cleaned
  */
-export const knownConfigFiles = [
-  'client_info.json',
-  'tokens.json',
-  'code_verifier.txt',
-];
+export const knownConfigFiles = ['client_info.json', 'tokens.json', 'code_verifier.txt']
 
 /**
  * Deletes all known configuration files for a specific server
@@ -48,7 +45,9 @@ export async function cleanServerConfig(serverUrlHash: string): Promise<void> {
  * @returns The path to the configuration directory
  */
 export function getConfigDir(): string {
-  return process.env.MCP_REMOTE_CONFIG_DIR || path.join(os.homedir(), '.mcp-auth')
+  const baseConfigDir = process.env.MCP_REMOTE_CONFIG_DIR || path.join(os.homedir(), '.mcp-auth')
+  // Add a version subdirectory so we don't need to worry about backwards/forwards compatibility yet
+  return path.join(baseConfigDir, `mcp-remote-${MCP_REMOTE_VERSION}`)
 }
 
 /**
@@ -110,20 +109,20 @@ export async function deleteConfigFile(serverUrlHash: string, filename: string):
  * @returns The parsed file content or undefined if the file doesn't exist
  */
 export async function readJsonFile<T>(
-  serverUrlHash: string, 
-  filename: string, 
+  serverUrlHash: string,
+  filename: string,
   schema: any,
-  clean: boolean = false
+  clean: boolean = false,
 ): Promise<T | undefined> {
   try {
     await ensureConfigDir()
-    
+
     // If clean flag is set, delete the file before trying to read it
     if (clean) {
       await deleteConfigFile(serverUrlHash, filename)
       return undefined
     }
-    
+
     const filePath = getConfigFilePath(serverUrlHash, filename)
     const content = await fs.readFile(filePath, 'utf-8')
     return await schema.parseAsync(JSON.parse(content))
@@ -141,11 +140,7 @@ export async function readJsonFile<T>(
  * @param filename The name of the file to write
  * @param data The data to write
  */
-export async function writeJsonFile(
-  serverUrlHash: string, 
-  filename: string, 
-  data: any
-): Promise<void> {
+export async function writeJsonFile(serverUrlHash: string, filename: string, data: any): Promise<void> {
   try {
     await ensureConfigDir()
     const filePath = getConfigFilePath(serverUrlHash, filename)
@@ -165,20 +160,20 @@ export async function writeJsonFile(
  * @returns The file content as a string
  */
 export async function readTextFile(
-  serverUrlHash: string, 
+  serverUrlHash: string,
   filename: string,
   errorMessage?: string,
-  clean: boolean = false
+  clean: boolean = false,
 ): Promise<string> {
   try {
     await ensureConfigDir()
-    
+
     // If clean flag is set, delete the file before trying to read it
     if (clean) {
       await deleteConfigFile(serverUrlHash, filename)
       throw new Error('File deleted due to clean flag')
     }
-    
+
     const filePath = getConfigFilePath(serverUrlHash, filename)
     return await fs.readFile(filePath, 'utf-8')
   } catch (error) {
@@ -192,11 +187,7 @@ export async function readTextFile(
  * @param filename The name of the file to write
  * @param text The text to write
  */
-export async function writeTextFile(
-  serverUrlHash: string, 
-  filename: string, 
-  text: string
-): Promise<void> {
+export async function writeTextFile(serverUrlHash: string, filename: string, text: string): Promise<void> {
   try {
     await ensureConfigDir()
     const filePath = getConfigFilePath(serverUrlHash, filename)
@@ -205,4 +196,4 @@ export async function writeTextFile(
     console.error(`Error writing ${filename}:`, error)
     throw error
   }
-}
\ No newline at end of file
+}
diff --git a/src/lib/utils.ts b/src/lib/utils.ts
index e9b4bf3..3cbb1f6 100644
--- a/src/lib/utils.ts
+++ b/src/lib/utils.ts
@@ -191,12 +191,12 @@ export async function parseCommandLineArgs(args: string[], defaultPort: number,
   // Check for --clean flag
   const cleanIndex = args.indexOf('--clean')
   const clean = cleanIndex !== -1
-  
+
   // Remove the flag from args if it exists
   if (clean) {
     args.splice(cleanIndex, 1)
   }
-  
+
   const serverUrl = args[0]
   const specifiedPort = args[1] ? parseInt(args[1]) : undefined
 
@@ -221,7 +221,7 @@ export async function parseCommandLineArgs(args: string[], defaultPort: number,
   } else {
     console.error(`Using automatically selected callback port: ${callbackPort}`)
   }
-  
+
   if (clean) {
     console.error('Clean mode enabled: config files will be reset before reading')
   }
@@ -243,3 +243,5 @@ export function setupSignalHandlers(cleanup: () => Promise<void>) {
   // Keep the process alive
   process.stdin.resume()
 }
+
+export const MCP_REMOTE_VERSION = require('../../package.json').version